Online supplements to print publications

Palmer, et al. (2006) Rapid quantitative profiling of complex microbial populations.Nucleic Acids Res, 34(1), e5.
[Electronic version and online supplement]

Bik EM, et al. (2006) Molecular analysis of the bacterial microbiota in the human stomach. Proc Natl Acad Sci U S A, 103(3), 732-7.
[Electronic version and online supplement]

Diavatopoulos, et al (2005) Bordetella pertussis, the Causative Agent of Whooping Cough, Evolved from a Distinct, Human-Associated Lineage of B. bronchiseptica. PLoS Pathog., 1(4), e45.
[Electronic version and online supplement]

Griffiths, et al. (2005) Genomewide Analysis of the Host Response to Malaria in Kenyan Children. Journal of Infectious Diseases, 191, 1599-1611.
[ Electronic version and online supplement]

Eckburg, et al. (2005) Diversity of the Human Intestinal Microbial Flora. Science, 308(5728), 1635-1638.
[ Electronic version (Science)] [Download sequence data (ARB database)] [Supporting Online Material]

Rubins, et al. (2004) The host response to smallpox: Analysis of the gene expression program in peripheral blood cells in a nonhuman primate model. Proc. Natl. Acad. Sci., 101(42), 15190-15195.
[Electronic version and online supplement]

Lepp, et al. (2004) Methanogenic Archaea and human periodontal disease. Proc. Natl. Acad. Sci.,101(16), 6176-81.
[Electronic version and online supplement]

Cummings, et al. (2004) Bordetella Species Are Distinguished by Patterns of Substantial Gene Loss and Host Adaptation. Journal of Bacteriology, 186(5), 1484-1492.
[Supplementary Materials] [Electronic Version (JB)]

Ouverney, et al. (2003) Single-cell enumeration of an uncultivated TM7 subgroup in the human subgingival crevice. Appl. Environ. Microbiol., 69(10), 6294-8.
[catFISH protocol] [Electronic Version (AEM)]

Boldrick, et al.(2002) Stereotyped and specific gene expression programs in human innate immune responses to bacteria. Proc. Natl. Acad. Sci, 99, 972-977.
[Supplemental Materials] [Electronic version (PNAS)]

Nikkari, et al.(2002) Broad-Range Bacterial Detection and the Analysis of Unexplained Death and Critical Illness. Emerg. Infect. Dis. J., 8, 188-194.
[Supplemental Materials] [Electronic version (EID)]

Nikkari, et al.(2001) Does blood of healthy subjects contain bacterial ribosomal DNA? J. Clin. Micro., 39, 1956-1959.
[Supplement] [Electronic version (JCM)]

Belcher, et al. (2000) The transcriptional responses of respiratory epithelial cells to Bordetella pertussis reveal host defensive and pathogen counter-defensive strategies. Proc. Natl. Acad. Sci. USA, 97, 13847-13852.
[Supplement][Electronic version (PNAS)]